Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh23Q99PF4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.97□□□□□ -0.17
Cdh23Q99PF4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Gm44551-201ENSMUST00000208804 171 ntBASIC13.97□□□□□ -0.17
Cdh23Q99PF4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cdh23Q99PF4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.96□□□□□ -0.17
Cdh23Q99PF4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.96□□□□□ -0.17
Cdh23Q99PF4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Gm11667-201ENSMUST00000119828 486 ntBASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdh23Q99PF4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Cdh23Q99PF4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.96□□□□□ -0.18
Cdh23Q99PF4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Cdh23Q99PF4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh23Q99PF4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.96□□□□□ -0.18
Cdh23Q99PF4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Cdh23Q99PF4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Cdh23Q99PF4 Gm43378-201ENSMUST00000199336 582 ntBASIC13.96□□□□□ -0.18
Cdh23Q99PF4 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh23Q99PF4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Cdh23Q99PF4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh23Q99PF4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdh23Q99PF4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms