Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Raf1Q99N57 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.63□□□□□ -0.39
Raf1Q99N57 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raf1Q99N57 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raf1Q99N57 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raf1Q99N57 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Raf1Q99N57 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.63□□□□□ -0.39
Raf1Q99N57 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Raf1Q99N57 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.62□□□□□ -0.39
Raf1Q99N57 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Raf1Q99N57 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.62□□□□□ -0.39
Raf1Q99N57 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.62□□□□□ -0.39
Raf1Q99N57 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Raf1Q99N57 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.62□□□□□ -0.39
Raf1Q99N57 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Gm2272-201ENSMUST00000194903 582 ntBASIC12.62□□□□□ -0.39
Raf1Q99N57 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Raf1Q99N57 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.62□□□□□ -0.39
Raf1Q99N57 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.62□□□□□ -0.39
Raf1Q99N57 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Raf1Q99N57 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Raf1Q99N57 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Raf1Q99N57 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.62□□□□□ -0.39
Raf1Q99N57 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Raf1Q99N57 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Raf1Q99N57 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.61□□□□□ -0.39
Raf1Q99N57 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Gm27301-201ENSMUST00000184012 127 ntBASIC12.61□□□□□ -0.39
Raf1Q99N57 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.61□□□□□ -0.39
Raf1Q99N57 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Gm17968-201ENSMUST00000194902 784 ntBASIC12.61□□□□□ -0.39
Raf1Q99N57 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.61□□□□□ -0.39
Raf1Q99N57 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.61□□□□□ -0.39
Raf1Q99N57 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Raf1Q99N57 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Raf1Q99N57 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms