Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm21826-201ENSMUST00000187451 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21198-201ENSMUST00000188393 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21749-201ENSMUST00000189343 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21901-201ENSMUST00000189568 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm29424-201ENSMUST00000189716 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm28599-201ENSMUST00000189838 694 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21867-201ENSMUST00000189917 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm29269-201ENSMUST00000190087 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21722-201ENSMUST00000190153 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm28423-201ENSMUST00000190701 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21899-201ENSMUST00000190745 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21910-201ENSMUST00000191163 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21849-201ENSMUST00000191571 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm28678-201ENSMUST00000191593 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm20910-201ENSMUST00000193268 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm21871-201ENSMUST00000194621 696 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap3Q99LM2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cdk5rap3Q99LM2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap3Q99LM2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cdk5rap3Q99LM2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap3Q99LM2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap3Q99LM2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap3Q99LM2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap3Q99LM2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap3Q99LM2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cdk5rap3Q99LM2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cdk5rap3Q99LM2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap3Q99LM2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap3Q99LM2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Gm38225-201ENSMUST00000194001 393 ntBASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.51□□□□□ -0.09
Cdk5rap3Q99LM2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms