Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.72□□□□□ -0.05
Clp1Q99LI9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Clp1Q99LI9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Clp1Q99LI9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Gm29741-201ENSMUST00000192667 421 ntBASIC14.71□□□□□ -0.05
Clp1Q99LI9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.71□□□□□ -0.05
Clp1Q99LI9 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Clp1Q99LI9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.71□□□□□ -0.05
Clp1Q99LI9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Clp1Q99LI9 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.71□□□□□ -0.05
Clp1Q99LI9 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.71□□□□□ -0.06
Clp1Q99LI9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clp1Q99LI9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clp1Q99LI9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clp1Q99LI9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Clp1Q99LI9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.7□□□□□ -0.06
Clp1Q99LI9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Clp1Q99LI9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.7□□□□□ -0.06
Clp1Q99LI9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.7□□□□□ -0.06
Clp1Q99LI9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clp1Q99LI9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Clp1Q99LI9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.69□□□□□ -0.06
Clp1Q99LI9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Gm14723-201ENSMUST00000118686 215 ntBASIC14.69□□□□□ -0.06
Clp1Q99LI9 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.69□□□□□ -0.06
Clp1Q99LI9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Gm45880-201ENSMUST00000213041 853 ntBASIC14.69□□□□□ -0.06
Clp1Q99LI9 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.69□□□□□ -0.06
Clp1Q99LI9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.69□□□□□ -0.06
Clp1Q99LI9 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.69□□□□□ -0.06
Clp1Q99LI9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clp1Q99LI9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms