Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf3Q99LI7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Gm25287-201ENSMUST00000103846 110 ntBASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Gm22918-201ENSMUST00000103855 110 ntBASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 AA619741-201ENSMUST00000195095 646 ntBASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Gm18049-201ENSMUST00000208909 581 ntBASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.57□□□□□ -0.24
Cstf3Q99LI7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cstf3Q99LI7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Gm4995-201ENSMUST00000117247 432 ntBASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cstf3Q99LI7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Gm13365-201ENSMUST00000121188 973 ntBASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Gm9824-201ENSMUST00000178707 561 ntBASIC13.55□□□□□ -0.24
Cstf3Q99LI7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cstf3Q99LI7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms