Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.53□□□□□ -0.24
Rab28Q99KL7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Gm16215-201ENSMUST00000161990 637 ntBASIC13.53□□□□□ -0.24
Rab28Q99KL7 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.53□□□□□ -0.24
Rab28Q99KL7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rab28Q99KL7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rab28Q99KL7 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rab28Q99KL7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
Rab28Q99KL7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rab28Q99KL7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rab28Q99KL7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rab28Q99KL7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
Rab28Q99KL7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Gm21854-201ENSMUST00000179901 471 ntBASIC13.52□□□□□ -0.25
Rab28Q99KL7 Gm7730-201ENSMUST00000212486 454 ntBASIC13.52□□□□□ -0.25
Rab28Q99KL7 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.52□□□□□ -0.25
Rab28Q99KL7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab28Q99KL7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.51□□□□□ -0.25
Rab28Q99KL7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.51□□□□□ -0.25
Rab28Q99KL7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.51□□□□□ -0.25
Rab28Q99KL7 Mir497b-201ENSMUST00000093601 125 ntBASIC13.51□□□□□ -0.25
Rab28Q99KL7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.51□□□□□ -0.25
Rab28Q99KL7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab28Q99KL7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rab28Q99KL7 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.5□□□□□ -0.25
Rab28Q99KL7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab28Q99KL7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab28Q99KL7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms