Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.79□□□□□ -0.36
Lims1Q99JW4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lims1Q99JW4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.78□□□□□ -0.36
Lims1Q99JW4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Gm18057-201ENSMUST00000208220 503 ntBASIC12.78□□□□□ -0.36
Lims1Q99JW4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Gm10175-201ENSMUST00000086013 645 ntBASIC12.78□□□□□ -0.36
Lims1Q99JW4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lims1Q99JW4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lims1Q99JW4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lims1Q99JW4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lims1Q99JW4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lims1Q99JW4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lims1Q99JW4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lims1Q99JW4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lims1Q99JW4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lims1Q99JW4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lims1Q99JW4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.76□□□□□ -0.37
Lims1Q99JW4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lims1Q99JW4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms