Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Gm15376-201ENSMUST00000122258 783 ntBASIC16.1■□□□□ 0.17
Rfc4Q99J62 Gm26464-201ENSMUST00000157094 305 ntBASIC16.1■□□□□ 0.17
Rfc4Q99J62 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Gm24420-201ENSMUST00000176676 59 ntBASIC16.1■□□□□ 0.17
Rfc4Q99J62 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.1■□□□□ 0.17
Rfc4Q99J62 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc4Q99J62 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.09■□□□□ 0.17
Rfc4Q99J62 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.09■□□□□ 0.17
Rfc4Q99J62 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.09■□□□□ 0.17
Rfc4Q99J62 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.09■□□□□ 0.17
Rfc4Q99J62 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rfc4Q99J62 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfc4Q99J62 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rfc4Q99J62 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfc4Q99J62 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfc4Q99J62 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfc4Q99J62 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfc4Q99J62 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Gm13689-201ENSMUST00000119360 685 ntBASIC16.08■□□□□ 0.16
Rfc4Q99J62 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.08■□□□□ 0.16
Rfc4Q99J62 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Gm27772-201ENSMUST00000184900 187 ntBASIC16.08■□□□□ 0.16
Rfc4Q99J62 Gm29127-201ENSMUST00000188304 517 ntBASIC16.08■□□□□ 0.16
Rfc4Q99J62 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Gm38671-201ENSMUST00000200573 130 ntBASIC16.08■□□□□ 0.16
Rfc4Q99J62 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.08■□□□□ 0.16
Rfc4Q99J62 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.08■□□□□ 0.16
Rfc4Q99J62 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.08■□□□□ 0.16
Rfc4Q99J62 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.08■□□□□ 0.16
Rfc4Q99J62 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.08■□□□□ 0.16
Rfc4Q99J62 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.08■□□□□ 0.16
Rfc4Q99J62 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc4Q99J62 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Mir1247-201ENSMUST00000116706 82 ntBASIC16.07■□□□□ 0.16
Rfc4Q99J62 Gm15371-201ENSMUST00000117057 784 ntBASIC16.07■□□□□ 0.16
Rfc4Q99J62 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.07■□□□□ 0.16
Rfc4Q99J62 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Rfc4Q99J62 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.07■□□□□ 0.16
Rfc4Q99J62 Gm6983-201ENSMUST00000214912 628 ntBASIC16.07■□□□□ 0.16
Rfc4Q99J62 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms