Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col20a1Q923P0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Gm15376-201ENSMUST00000122258 783 ntBASIC16.5■□□□□ 0.23
Col20a1Q923P0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Col20a1Q923P0 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.5■□□□□ 0.23
Col20a1Q923P0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.49■□□□□ 0.23
Col20a1Q923P0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.49■□□□□ 0.23
Col20a1Q923P0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.49■□□□□ 0.23
Col20a1Q923P0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col20a1Q923P0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Gm12485-201ENSMUST00000119641 291 ntBASIC16.48■□□□□ 0.23
Col20a1Q923P0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col20a1Q923P0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col20a1Q923P0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col20a1Q923P0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.47■□□□□ 0.23
Col20a1Q923P0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col20a1Q923P0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms