Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clip1Q922J3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Clip1Q922J3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Clip1Q922J3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Clip1Q922J3 Gm38102-201ENSMUST00000192791 1935 ntBASIC21.78■■□□□ 1.08
Clip1Q922J3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clip1Q922J3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clip1Q922J3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clip1Q922J3 Gm5687-201ENSMUST00000118252 640 ntBASIC21.78■■□□□ 1.08
Clip1Q922J3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC21.78■■□□□ 1.08
Clip1Q922J3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC21.78■■□□□ 1.08
Clip1Q922J3 Gm2445-201ENSMUST00000182798 989 ntBASIC21.78■■□□□ 1.08
Clip1Q922J3 Gm42693-201ENSMUST00000196779 631 ntBASIC21.78■■□□□ 1.08
Clip1Q922J3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Clip1Q922J3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clip1Q922J3 Gm13730-201ENSMUST00000121036 1462 ntBASIC21.78■■□□□ 1.08
Clip1Q922J3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Clip1Q922J3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Clip1Q922J3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clip1Q922J3 Gm45133-201ENSMUST00000207548 2773 ntBASIC21.78■■□□□ 1.08
Clip1Q922J3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clip1Q922J3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC21.77■■□□□ 1.08
Clip1Q922J3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC21.77■■□□□ 1.08
Clip1Q922J3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC21.77■■□□□ 1.08
Clip1Q922J3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clip1Q922J3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Clip1Q922J3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clip1Q922J3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clip1Q922J3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC21.77■■□□□ 1.08
Clip1Q922J3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Clip1Q922J3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Clip1Q922J3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Clip1Q922J3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Clip1Q922J3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Clip1Q922J3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clip1Q922J3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clip1Q922J3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clip1Q922J3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
Clip1Q922J3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Clip1Q922J3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clip1Q922J3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clip1Q922J3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Clip1Q922J3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clip1Q922J3 AC126253.1-201ENSMUST00000227974 824 ntBASIC21.76■■□□□ 1.07
Clip1Q922J3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clip1Q922J3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clip1Q922J3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clip1Q922J3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC21.76■■□□□ 1.07
Clip1Q922J3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clip1Q922J3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC21.76■■□□□ 1.07
Clip1Q922J3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Gm17420-201ENSMUST00000164753 153 ntBASIC21.75■■□□□ 1.07
Clip1Q922J3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
Clip1Q922J3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC21.75■■□□□ 1.07
Clip1Q922J3 Gm27514-201ENSMUST00000183692 110 ntBASIC21.75■■□□□ 1.07
Clip1Q922J3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC21.75■■□□□ 1.07
Clip1Q922J3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Clip1Q922J3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Clip1Q922J3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Clip1Q922J3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Clip1Q922J3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Clip1Q922J3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC21.75■■□□□ 1.07
Clip1Q922J3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Clip1Q922J3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC21.75■■□□□ 1.07
Clip1Q922J3 Gm7553-201ENSMUST00000185805 1426 ntBASIC21.75■■□□□ 1.07
Clip1Q922J3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Clip1Q922J3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 Gm10156-201ENSMUST00000122364 462 ntBASIC21.74■■□□□ 1.07
Clip1Q922J3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC21.74■■□□□ 1.07
Clip1Q922J3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC21.74■■□□□ 1.07
Clip1Q922J3 Gm8810-201ENSMUST00000172895 754 ntBASIC21.74■■□□□ 1.07
Clip1Q922J3 Gm42550-201ENSMUST00000201553 960 ntBASIC21.74■■□□□ 1.07
Clip1Q922J3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Clip1Q922J3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms