Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Mir125a-201ENSMUST00000083545 68 ntBASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdha3Q91Y16 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Gm14057-201ENSMUST00000120631 482 ntBASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Gm27306-201ENSMUST00000183970 107 ntBASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdha3Q91Y16 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Shd-206ENSMUST00000225145 998 ntBASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 BC001981-202ENSMUST00000191393 1545 ntBASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha3Q91Y16 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha3Q91Y16 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms