Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Gm20949-201ENSMUST00000206478 952 ntBASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdha9Q91Y11 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Auts2-212ENSMUST00000178555 309 ntBASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Gm2445-201ENSMUST00000182798 989 ntBASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Gm27838-201ENSMUST00000184829 128 ntBASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha9Q91Y11 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Gm15487-201ENSMUST00000122373 465 ntBASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Mir497b-201ENSMUST00000093601 125 ntBASIC14.88□□□□□ -0.03
Pcdha9Q91Y11 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms