Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb1Q91Y08 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb1Q91Y08 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb1Q91Y08 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb1Q91Y08 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb1Q91Y08 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb1Q91Y08 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb1Q91Y08 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Gm33320-201ENSMUST00000192232 530 ntBASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb1Q91Y08 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb1Q91Y08 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms