Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Gm13924-201ENSMUST00000119899 486 ntBASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Gm14042-201ENSMUST00000120139 833 ntBASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Gm19175-201ENSMUST00000199895 916 ntBASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 AC134860.5-201ENSMUST00000225071 1249 ntBASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Gm10275-202ENSMUST00000168697 495 ntBASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Gm6888-201ENSMUST00000221983 706 ntBASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Gm10275-201ENSMUST00000092620 635 ntBASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb20Q91XZ9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Pcdhb20Q91XZ9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Gm14767-201ENSMUST00000121559 586 ntBASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Gm27533-201ENSMUST00000183800 152 ntBASIC13.83□□□□□ -0.2
Pcdhb20Q91XZ9 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms