Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Gm8927-201ENSMUST00000181978 981 ntBASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Gm43438-201ENSMUST00000198133 379 ntBASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Gm3222-201ENSMUST00000071282 990 ntBASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx39aQ8VDW0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Gm15240-201ENSMUST00000118156 720 ntBASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Gm13385-201ENSMUST00000121089 220 ntBASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Gm43433-201ENSMUST00000196573 481 ntBASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Gm18307-201ENSMUST00000206864 949 ntBASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx39aQ8VDW0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Gm28911-201ENSMUST00000188837 117 ntBASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx39aQ8VDW0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.52■□□□□ 0.07
Ddx39aQ8VDW0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms