Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nup35Q8R4R6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Gm12882-201ENSMUST00000121696 517 ntBASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Gm10060-201ENSMUST00000212002 111 ntBASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nup35Q8R4R6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Thap2-203ENSMUST00000218989 527 ntBASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nup35Q8R4R6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nup35Q8R4R6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms