Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afjQ8R1M2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afjQ8R1M2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afjQ8R1M2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.02□□□□□ -0.32
H2afjQ8R1M2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Gm15427-201ENSMUST00000117288 531 ntBASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Gm15483-201ENSMUST00000120338 456 ntBASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.02□□□□□ -0.33
H2afjQ8R1M2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.02□□□□□ -0.33
H2afjQ8R1M2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afjQ8R1M2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms