Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
Rpp40Q8R1F9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Gm6912-201ENSMUST00000117218 544 ntBASIC15□□□□□ -0.01
Rpp40Q8R1F9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Gm3809-201ENSMUST00000180973 1006 ntBASIC15□□□□□ -0.01
Rpp40Q8R1F9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpp40Q8R1F9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Rpp40Q8R1F9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp40Q8R1F9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms