Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lrrtm1Q8K377 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Gm10060-201ENSMUST00000212002 111 ntBASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrrtm1Q8K377 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Gm9103-201ENSMUST00000119371 405 ntBASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Gm16026-204ENSMUST00000162652 683 ntBASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Gm8584-201ENSMUST00000171982 758 ntBASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Gm9182-201ENSMUST00000217829 639 ntBASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrrtm1Q8K377 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms