Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cystm1Q8K353 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Cystm1Q8K353 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC8.82□□□□□ -1
Cystm1Q8K353 CT025624.1-201ENSMUST00000224007 2700 ntBASIC8.82□□□□□ -1
Cystm1Q8K353 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
Cystm1Q8K353 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC8.82□□□□□ -1
Cystm1Q8K353 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC8.82□□□□□ -1
Cystm1Q8K353 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC8.82□□□□□ -1
Cystm1Q8K353 Matn2-203ENSMUST00000226766 3252 ntBASIC8.82□□□□□ -1
Cystm1Q8K353 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Cystm1Q8K353 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Gm15467-201ENSMUST00000120582 445 ntBASIC8.82□□□□□ -1
Cystm1Q8K353 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC8.82□□□□□ -1
Cystm1Q8K353 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC8.82□□□□□ -1
Cystm1Q8K353 Gm6257-201ENSMUST00000163864 910 ntBASIC8.82□□□□□ -1
Cystm1Q8K353 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Cystm1Q8K353 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC8.82□□□□□ -1
Cystm1Q8K353 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC8.82□□□□□ -1
Cystm1Q8K353 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC8.82□□□□□ -1
Cystm1Q8K353 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Cystm1Q8K353 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC8.82□□□□□ -1
Cystm1Q8K353 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Cystm1Q8K353 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Cystm1Q8K353 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cystm1Q8K353 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Cystm1Q8K353 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC8.82□□□□□ -1
Cystm1Q8K353 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cystm1Q8K353 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cystm1Q8K353 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Cystm1Q8K353 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC8.81□□□□□ -1
Cystm1Q8K353 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC8.81□□□□□ -1
Cystm1Q8K353 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC8.81□□□□□ -1
Cystm1Q8K353 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cystm1Q8K353 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
Cystm1Q8K353 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC8.81□□□□□ -1
Cystm1Q8K353 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC8.81□□□□□ -1
Cystm1Q8K353 Gm2308-201ENSMUST00000166539 1004 ntBASIC8.81□□□□□ -1
Cystm1Q8K353 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Cystm1Q8K353 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC8.81□□□□□ -1
Cystm1Q8K353 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms