Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Gm5566-201ENSMUST00000116118 459 ntBASIC14.34□□□□□ -0.11
CopaQ8CIE6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Gm9719-201ENSMUST00000162765 543 ntBASIC14.34□□□□□ -0.11
CopaQ8CIE6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.34□□□□□ -0.11
CopaQ8CIE6 Gm27680-201ENSMUST00000184192 160 ntBASIC14.34□□□□□ -0.11
CopaQ8CIE6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Gm45098-201ENSMUST00000207179 657 ntBASIC14.34□□□□□ -0.11
CopaQ8CIE6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CopaQ8CIE6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CopaQ8CIE6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.33□□□□□ -0.11
CopaQ8CIE6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CopaQ8CIE6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.33□□□□□ -0.11
CopaQ8CIE6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CopaQ8CIE6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.33□□□□□ -0.11
CopaQ8CIE6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CopaQ8CIE6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.33□□□□□ -0.12
CopaQ8CIE6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Gm2451-201ENSMUST00000199447 999 ntBASIC14.33□□□□□ -0.12
CopaQ8CIE6 Gm10290-201ENSMUST00000200451 999 ntBASIC14.33□□□□□ -0.12
CopaQ8CIE6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CopaQ8CIE6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.32□□□□□ -0.12
CopaQ8CIE6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.32□□□□□ -0.12
CopaQ8CIE6 Gm44344-201ENSMUST00000200287 129 ntBASIC14.32□□□□□ -0.12
CopaQ8CIE6 Gm7775-201ENSMUST00000218871 853 ntBASIC14.32□□□□□ -0.12
CopaQ8CIE6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CopaQ8CIE6 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CopaQ8CIE6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms