Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Syt7-205ENSMUST00000224135 1557 ntBASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox30Q8CGW4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.3■□□□□ 0.04
Sox30Q8CGW4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Mir125a-201ENSMUST00000083545 68 ntBASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Gm10175-201ENSMUST00000086013 645 ntBASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox30Q8CGW4 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Gm5364-201ENSMUST00000216789 889 ntBASIC15.29■□□□□ 0.04
Sox30Q8CGW4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sox30Q8CGW4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms