Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Gm29741-201ENSMUST00000192667 421 ntBASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rdh1Q8CGV4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Gm45384-201ENSMUST00000210451 277 ntBASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rdh1Q8CGV4 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.58□□□□□ -0.23
Rdh1Q8CGV4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rdh1Q8CGV4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Rdh1Q8CGV4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rdh1Q8CGV4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rdh1Q8CGV4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Gm11918-201ENSMUST00000121660 179 ntBASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Gm24420-201ENSMUST00000176676 59 ntBASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms