Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 AA543401-201ENSMUST00000164248 1269 ntBASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Gm18766-201ENSMUST00000189811 808 ntBASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Mir125a-201ENSMUST00000083545 68 ntBASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Aph1bQ8C7N7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Gm44771-201ENSMUST00000206975 626 ntBASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Aph1bQ8C7N7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Aph1bQ8C7N7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms