Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Gm27680-201ENSMUST00000184192 160 ntBASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Gm44344-201ENSMUST00000200287 129 ntBASIC15.46■□□□□ 0.07
Trim9Q8C7M3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Gm6888-201ENSMUST00000221983 706 ntBASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim9Q8C7M3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Trim9Q8C7M3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
Trim9Q8C7M3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.46■□□□□ 0.06
Trim9Q8C7M3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim9Q8C7M3 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Gm13223-201ENSMUST00000118609 747 ntBASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Gm27321-201ENSMUST00000185021 205 ntBASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Gm43703-201ENSMUST00000200523 763 ntBASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim9Q8C7M3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trim9Q8C7M3 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.44■□□□□ 0.06
Trim9Q8C7M3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms