Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Gm27516-201ENSMUST00000184237 98 ntBASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col6a6Q8C6K9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Gm21470-201ENSMUST00000187680 696 ntBASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Gm43758-201ENSMUST00000199500 367 ntBASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col6a6Q8C6K9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Gm12882-201ENSMUST00000121696 517 ntBASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Gm27772-201ENSMUST00000184900 187 ntBASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Gm37259-201ENSMUST00000193903 849 ntBASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a6Q8C6K9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms