Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Gm2445-201ENSMUST00000182798 989 ntBASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Gm27618-201ENSMUST00000183671 60 ntBASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Gm38294-201ENSMUST00000192831 381 ntBASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.47□□□□□ -0.09
Trub1Q8C0D0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trub1Q8C0D0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Gm33320-201ENSMUST00000192232 530 ntBASIC14.46□□□□□ -0.09
Trub1Q8C0D0 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trub1Q8C0D0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trub1Q8C0D0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trub1Q8C0D0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trub1Q8C0D0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trub1Q8C0D0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trub1Q8C0D0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.46□□□□□ -0.1
Trub1Q8C0D0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trub1Q8C0D0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trub1Q8C0D0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trub1Q8C0D0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trub1Q8C0D0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Gm46209-201ENSMUST00000217912 553 ntBASIC14.45□□□□□ -0.1
Trub1Q8C0D0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.45□□□□□ -0.1
Trub1Q8C0D0 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trub1Q8C0D0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms