Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Gm24420-201ENSMUST00000176676 59 ntBASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Mir497b-201ENSMUST00000093601 125 ntBASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sh3rf2Q8BZT2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Gm9002-201ENSMUST00000178437 499 ntBASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Gm43094-201ENSMUST00000196549 921 ntBASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sh3rf2Q8BZT2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms