Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Rd3Q8BRE0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rd3Q8BRE0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Rd3Q8BRE0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rd3Q8BRE0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rd3Q8BRE0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Rd3Q8BRE0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.83□□□□□ -0.03
Rd3Q8BRE0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rd3Q8BRE0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rd3Q8BRE0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rd3Q8BRE0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Gm6244-201ENSMUST00000178732 841 ntBASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Gm43094-201ENSMUST00000196549 921 ntBASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rd3Q8BRE0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Gm15240-201ENSMUST00000118156 720 ntBASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Gm8927-201ENSMUST00000181978 981 ntBASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Gm3222-201ENSMUST00000071282 990 ntBASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rd3Q8BRE0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms