Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smg1Q8BKX6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.61□□□□□ -0.55
Smg1Q8BKX6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Smg1Q8BKX6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smg1Q8BKX6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smg1Q8BKX6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Smg1Q8BKX6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smg1Q8BKX6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smg1Q8BKX6 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.61□□□□□ -0.55
Smg1Q8BKX6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.6□□□□□ -0.55
Smg1Q8BKX6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Smg1Q8BKX6 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Gm13570-201ENSMUST00000140763 309 ntBASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Gm11439-201ENSMUST00000118598 409 ntBASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Gm11964-201ENSMUST00000120982 444 ntBASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.59□□□□□ -0.55
Smg1Q8BKX6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smg1Q8BKX6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smg1Q8BKX6 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smg1Q8BKX6 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.58□□□□□ -0.55
Smg1Q8BKX6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smg1Q8BKX6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms