Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Srrm4Q8BKA3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Gm44344-201ENSMUST00000200287 129 ntBASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Mir125a-201ENSMUST00000083545 68 ntBASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srrm4Q8BKA3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Gm15653-201ENSMUST00000119247 907 ntBASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Gm27989-201ENSMUST00000184721 107 ntBASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Gm9063-201ENSMUST00000223299 582 ntBASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.16□□□□□ -0.46
Srrm4Q8BKA3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Gm27321-201ENSMUST00000185021 205 ntBASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.15□□□□□ -0.46
Srrm4Q8BKA3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms