Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp2bQ8BJF9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Gm5364-201ENSMUST00000216789 889 ntBASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp2bQ8BJF9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Gm20553-201ENSMUST00000204205 844 ntBASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp2bQ8BJF9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Gm11543-201ENSMUST00000120758 370 ntBASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Gm1401-201ENSMUST00000122048 772 ntBASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Gm12260-201ENSMUST00000122447 411 ntBASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chmp2bQ8BJF9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms