Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Gm15483-201ENSMUST00000120338 456 ntBASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Gm25925-201ENSMUST00000158314 306 ntBASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Gm9726-201ENSMUST00000180321 678 ntBASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Gm38225-201ENSMUST00000194001 393 ntBASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh20Q8BIZ0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Mir449b-201ENSMUST00000104833 80 ntBASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Gm13616-201ENSMUST00000120600 222 ntBASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Gm27920-201ENSMUST00000183953 96 ntBASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Gm44872-201ENSMUST00000207864 420 ntBASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh20Q8BIZ0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh20Q8BIZ0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh20Q8BIZ0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Pcdh20Q8BIZ0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh20Q8BIZ0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh20Q8BIZ0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pcdh20Q8BIZ0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdh20Q8BIZ0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.7□□□□□ -0.22
Pcdh20Q8BIZ0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms