Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Depdc1bQ8BH88 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Mir6977-201ENSMUST00000184960 64 ntBASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Depdc1bQ8BH88 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Depdc1bQ8BH88 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Depdc1bQ8BH88 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.27■□□□□ 0.03
Depdc1bQ8BH88 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Depdc1bQ8BH88 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.27■□□□□ 0.03
Depdc1bQ8BH88 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Depdc1bQ8BH88 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Depdc1bQ8BH88 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Depdc1bQ8BH88 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Depdc1bQ8BH88 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.27■□□□□ 0.03
Depdc1bQ8BH88 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Depdc1bQ8BH88 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Gm13453-201ENSMUST00000118708 357 ntBASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Gm27306-201ENSMUST00000183970 107 ntBASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Gm17837-201ENSMUST00000186435 985 ntBASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Gm29541-201ENSMUST00000191351 678 ntBASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Depdc1bQ8BH88 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Gm12428-201ENSMUST00000119844 727 ntBASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Depdc1bQ8BH88 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Depdc1bQ8BH88 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms