Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim50Q810I2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim50Q810I2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trim50Q810I2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim50Q810I2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim50Q810I2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trim50Q810I2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim50Q810I2 AA543401-201ENSMUST00000164248 1269 ntBASIC13.68□□□□□ -0.22
Trim50Q810I2 Gm25144-201ENSMUST00000179561 110 ntBASIC13.68□□□□□ -0.22
Trim50Q810I2 Gm25352-201ENSMUST00000179815 110 ntBASIC13.68□□□□□ -0.22
Trim50Q810I2 Gm27618-201ENSMUST00000183671 60 ntBASIC13.68□□□□□ -0.22
Trim50Q810I2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim50Q810I2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim50Q810I2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim50Q810I2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.68□□□□□ -0.22
Trim50Q810I2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim50Q810I2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.68□□□□□ -0.22
Trim50Q810I2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim50Q810I2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim50Q810I2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim50Q810I2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim50Q810I2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim50Q810I2 Gm38294-201ENSMUST00000192831 381 ntBASIC13.67□□□□□ -0.22
Trim50Q810I2 Shd-206ENSMUST00000225145 998 ntBASIC13.67□□□□□ -0.22
Trim50Q810I2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim50Q810I2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim50Q810I2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim50Q810I2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim50Q810I2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trim50Q810I2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim50Q810I2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim50Q810I2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.66□□□□□ -0.22
Trim50Q810I2 Mir1897-201ENSMUST00000122581 272 ntBASIC13.66□□□□□ -0.22
Trim50Q810I2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim50Q810I2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.66□□□□□ -0.22
Trim50Q810I2 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.66□□□□□ -0.22
Trim50Q810I2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.66□□□□□ -0.22
Trim50Q810I2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim50Q810I2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms