Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Gm22189-201ENSMUST00000103822 86 ntBASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Gm10766-202ENSMUST00000194123 606 ntBASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Gm8515-201ENSMUST00000194852 576 ntBASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Pcdh8Q7TSK3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh8Q7TSK3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh8Q7TSK3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh8Q7TSK3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh8Q7TSK3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Gm12091-201ENSMUST00000146791 830 ntBASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Gm21854-201ENSMUST00000179901 471 ntBASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh8Q7TSK3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Gm15957-201ENSMUST00000118893 974 ntBASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Gm37917-201ENSMUST00000194711 392 ntBASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh8Q7TSK3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms