Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Vma21Q78T54 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Vma21Q78T54 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Vma21Q78T54 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.41□□□□□ -0.58
Vma21Q78T54 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Gm12882-201ENSMUST00000121696 517 ntBASIC11.41□□□□□ -0.58
Vma21Q78T54 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Rpph1-201ENSMUST00000175096 319 ntBASIC11.41□□□□□ -0.58
Vma21Q78T54 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.41□□□□□ -0.58
Vma21Q78T54 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.41□□□□□ -0.58
Vma21Q78T54 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Vma21Q78T54 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.41□□□□□ -0.58
Vma21Q78T54 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.41□□□□□ -0.58
Vma21Q78T54 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Vma21Q78T54 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.41□□□□□ -0.58
Vma21Q78T54 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vma21Q78T54 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Vma21Q78T54 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.4□□□□□ -0.58
Vma21Q78T54 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Vma21Q78T54 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 Gm6973-201ENSMUST00000117080 721 ntBASIC11.4□□□□□ -0.58
Vma21Q78T54 Gm15427-201ENSMUST00000117288 531 ntBASIC11.4□□□□□ -0.58
Vma21Q78T54 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.4□□□□□ -0.58
Vma21Q78T54 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.4□□□□□ -0.58
Vma21Q78T54 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.4□□□□□ -0.58
Vma21Q78T54 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.4□□□□□ -0.58
Vma21Q78T54 Gm9727-201ENSMUST00000161387 555 ntBASIC11.4□□□□□ -0.58
Vma21Q78T54 Gm17271-201ENSMUST00000165535 355 ntBASIC11.4□□□□□ -0.58
Vma21Q78T54 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.4□□□□□ -0.58
Vma21Q78T54 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Vma21Q78T54 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.4□□□□□ -0.58
Vma21Q78T54 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.4□□□□□ -0.58
Vma21Q78T54 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vma21Q78T54 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Vma21Q78T54 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Vma21Q78T54 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Vma21Q78T54 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Vma21Q78T54 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Vma21Q78T54 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Vma21Q78T54 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Vma21Q78T54 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Vma21Q78T54 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Vma21Q78T54 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Vma21Q78T54 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.39□□□□□ -0.59
Vma21Q78T54 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
Vma21Q78T54 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.39□□□□□ -0.59
Vma21Q78T54 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.39□□□□□ -0.59
Vma21Q78T54 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.39□□□□□ -0.59
Vma21Q78T54 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vma21Q78T54 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms