Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Itm2b-204ENSMUST00000228637 783 ntBASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Gm43822-201ENSMUST00000200285 476 ntBASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Gm3961-201ENSMUST00000204425 994 ntBASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ddx55Q6ZPL9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Gm27516-201ENSMUST00000184237 98 ntBASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ddx55Q6ZPL9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ddx55Q6ZPL9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.83■□□□□ 0.13
Ddx55Q6ZPL9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Gm7584-201ENSMUST00000175829 940 ntBASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Gm27243-201ENSMUST00000183964 521 ntBASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Gm37008-201ENSMUST00000195712 319 ntBASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ddx55Q6ZPL9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx55Q6ZPL9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms