Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd1Q6PIP5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nudcd1Q6PIP5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nudcd1Q6PIP5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd1Q6PIP5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd1Q6PIP5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nudcd1Q6PIP5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Gm18018-201ENSMUST00000198273 408 ntBASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nudcd1Q6PIP5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nudcd1Q6PIP5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nudcd1Q6PIP5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms