Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Scaf4Q6PFF0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scaf4Q6PFF0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scaf4Q6PFF0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scaf4Q6PFF0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Gm2445-201ENSMUST00000182798 989 ntBASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.83□□□□□ -0.2
Scaf4Q6PFF0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Gm44608-201ENSMUST00000206827 855 ntBASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scaf4Q6PFF0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scaf4Q6PFF0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms