Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf220Q6PDX6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Gm25925-201ENSMUST00000158314 306 ntBASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Gm43767-201ENSMUST00000198933 381 ntBASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf220Q6PDX6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf220Q6PDX6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf220Q6PDX6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf220Q6PDX6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Rnf220Q6PDX6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf220Q6PDX6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf220Q6PDX6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rnf220Q6PDX6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf220Q6PDX6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Rnf220Q6PDX6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.27□□□□□ -0.28
Rnf220Q6PDX6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rnf220Q6PDX6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Gm13418-201ENSMUST00000119097 944 ntBASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Gm37153-201ENSMUST00000193637 231 ntBASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rnf220Q6PDX6 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf220Q6PDX6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms