Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.99■□□□□ 0.47
Chd4Q6PDQ2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Gm6023-201ENSMUST00000118217 606 ntBASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Gm11793-201ENSMUST00000120433 981 ntBASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Gm43818-201ENSMUST00000200605 466 ntBASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Chd4Q6PDQ2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Gm27516-201ENSMUST00000184237 98 ntBASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Gm38144-201ENSMUST00000192790 465 ntBASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Gm19309-201ENSMUST00000218295 205 ntBASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd4Q6PDQ2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Gm16372-201ENSMUST00000073088 450 ntBASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd4Q6PDQ2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.96■□□□□ 0.46
Chd4Q6PDQ2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Chd4Q6PDQ2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd4Q6PDQ2 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms