Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sp140Q6NSQ5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 AA543401-201ENSMUST00000164248 1269 ntBASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Gm2756-201ENSMUST00000195851 400 ntBASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Dupd1-202ENSMUST00000224735 548 ntBASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sp140Q6NSQ5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Gm12428-201ENSMUST00000119844 727 ntBASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sp140Q6NSQ5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms