Protein–RNA interactions for Protein: Q64364

Cdkn2a, Tumor suppressor ARF, mousemouse

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2aQ64364 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdkn2aQ64364 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cdkn2aQ64364 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cdkn2aQ64364 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Cdkn2aQ64364 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cdkn2aQ64364 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Gm17807-201ENSMUST00000186869 298 ntBASIC11.08□□□□□ -0.64
Cdkn2aQ64364 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdkn2aQ64364 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdkn2aQ64364 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms