Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VcanQ62059 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.88□□□□□ -0.35
VcanQ62059 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
VcanQ62059 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.88□□□□□ -0.35
VcanQ62059 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.88□□□□□ -0.35
VcanQ62059 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
VcanQ62059 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.88□□□□□ -0.35
VcanQ62059 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.88□□□□□ -0.35
VcanQ62059 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.88□□□□□ -0.35
VcanQ62059 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.88□□□□□ -0.35
VcanQ62059 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VcanQ62059 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.88□□□□□ -0.35
VcanQ62059 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.88□□□□□ -0.35
VcanQ62059 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.87□□□□□ -0.35
VcanQ62059 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.87□□□□□ -0.35
VcanQ62059 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.87□□□□□ -0.35
VcanQ62059 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.87□□□□□ -0.35
VcanQ62059 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.87□□□□□ -0.35
VcanQ62059 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.87□□□□□ -0.35
VcanQ62059 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.87□□□□□ -0.35
VcanQ62059 Gm37922-201ENSMUST00000195596 455 ntBASIC12.87□□□□□ -0.35
VcanQ62059 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VcanQ62059 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
VcanQ62059 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
VcanQ62059 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.87□□□□□ -0.35
VcanQ62059 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
VcanQ62059 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
VcanQ62059 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VcanQ62059 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.87□□□□□ -0.35
VcanQ62059 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VcanQ62059 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
VcanQ62059 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VcanQ62059 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VcanQ62059 Gm24548-201ENSMUST00000158650 108 ntBASIC12.86□□□□□ -0.35
VcanQ62059 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Gm37905-201ENSMUST00000195310 341 ntBASIC12.86□□□□□ -0.35
VcanQ62059 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
VcanQ62059 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VcanQ62059 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VcanQ62059 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
VcanQ62059 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.86□□□□□ -0.35
VcanQ62059 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.86□□□□□ -0.35
VcanQ62059 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
VcanQ62059 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VcanQ62059 Gm25517-201ENSMUST00000083865 134 ntBASIC12.86□□□□□ -0.35
VcanQ62059 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VcanQ62059 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VcanQ62059 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms