Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.81□□□□□ -0.68
Notch3Q61982 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.81□□□□□ -0.68
Notch3Q61982 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.81□□□□□ -0.68
Notch3Q61982 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.81□□□□□ -0.68
Notch3Q61982 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.81□□□□□ -0.68
Notch3Q61982 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.81□□□□□ -0.68
Notch3Q61982 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.81□□□□□ -0.68
Notch3Q61982 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.81□□□□□ -0.68
Notch3Q61982 Gm46209-201ENSMUST00000217912 553 ntBASIC10.81□□□□□ -0.68
Notch3Q61982 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.81□□□□□ -0.68
Notch3Q61982 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.81□□□□□ -0.68
Notch3Q61982 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Notch3Q61982 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.81□□□□□ -0.68
Notch3Q61982 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Notch3Q61982 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Notch3Q61982 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Notch3Q61982 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.8□□□□□ -0.68
Notch3Q61982 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.8□□□□□ -0.68
Notch3Q61982 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.8□□□□□ -0.68
Notch3Q61982 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.8□□□□□ -0.68
Notch3Q61982 Gm28760-201ENSMUST00000185995 736 ntBASIC10.8□□□□□ -0.68
Notch3Q61982 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Notch3Q61982 Gm2451-201ENSMUST00000199447 999 ntBASIC10.8□□□□□ -0.68
Notch3Q61982 Gm10290-201ENSMUST00000200451 999 ntBASIC10.8□□□□□ -0.68
Notch3Q61982 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Gm9797-201ENSMUST00000052902 613 ntBASIC10.8□□□□□ -0.68
Notch3Q61982 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Notch3Q61982 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.8□□□□□ -0.68
Notch3Q61982 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Notch3Q61982 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Notch3Q61982 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Notch3Q61982 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.8□□□□□ -0.68
Notch3Q61982 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Gm27892-201ENSMUST00000185017 106 ntBASIC10.8□□□□□ -0.68
Notch3Q61982 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.8□□□□□ -0.68
Notch3Q61982 Gm37230-201ENSMUST00000194491 818 ntBASIC10.8□□□□□ -0.68
Notch3Q61982 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.8□□□□□ -0.68
Notch3Q61982 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.8□□□□□ -0.68
Notch3Q61982 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.8□□□□□ -0.68
Notch3Q61982 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Notch3Q61982 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Notch3Q61982 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Notch3Q61982 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Notch3Q61982 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms