Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.25□□□□□ -0.29
Ripk1Q60855 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Ripk1Q60855 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ripk1Q60855 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.25□□□□□ -0.29
Ripk1Q60855 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.25□□□□□ -0.29
Ripk1Q60855 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Ripk1Q60855 Gm37935-201ENSMUST00000192012 982 ntBASIC13.25□□□□□ -0.29
Ripk1Q60855 AA619741-201ENSMUST00000195095 646 ntBASIC13.25□□□□□ -0.29
Ripk1Q60855 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.25□□□□□ -0.29
Ripk1Q60855 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ripk1Q60855 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ripk1Q60855 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ripk1Q60855 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ripk1Q60855 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ripk1Q60855 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.24□□□□□ -0.29
Ripk1Q60855 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Ripk1Q60855 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ripk1Q60855 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Gm15957-201ENSMUST00000118893 974 ntBASIC13.24□□□□□ -0.29
Ripk1Q60855 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Gm24158-201ENSMUST00000175263 71 ntBASIC13.24□□□□□ -0.29
Ripk1Q60855 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ripk1Q60855 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ripk1Q60855 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ripk1Q60855 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Ripk1Q60855 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Ripk1Q60855 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ripk1Q60855 BC001981-202ENSMUST00000191393 1545 ntBASIC13.23□□□□□ -0.29
Ripk1Q60855 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ripk1Q60855 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.23□□□□□ -0.29
Ripk1Q60855 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.23□□□□□ -0.29
Ripk1Q60855 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.23□□□□□ -0.29
Ripk1Q60855 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.23□□□□□ -0.29
Ripk1Q60855 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.23□□□□□ -0.29
Ripk1Q60855 Gm18766-201ENSMUST00000189811 808 ntBASIC13.23□□□□□ -0.29
Ripk1Q60855 Gm29541-201ENSMUST00000191351 678 ntBASIC13.23□□□□□ -0.29
Ripk1Q60855 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ripk1Q60855 Gm44608-201ENSMUST00000206827 855 ntBASIC13.23□□□□□ -0.29
Ripk1Q60855 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.23□□□□□ -0.29
Ripk1Q60855 Gm45453-201ENSMUST00000211758 853 ntBASIC13.23□□□□□ -0.29
Ripk1Q60855 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms