Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfaip3Q60769 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Gm9522-201ENSMUST00000182394 926 ntBASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Gm21470-201ENSMUST00000187680 696 ntBASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Gm44855-201ENSMUST00000205725 362 ntBASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Syt7-205ENSMUST00000224135 1557 ntBASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfaip3Q60769 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Gm7488-201ENSMUST00000117148 684 ntBASIC13.18□□□□□ -0.3
Tnfaip3Q60769 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Gm4804-201ENSMUST00000182234 999 ntBASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Gm2423-201ENSMUST00000074863 733 ntBASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Tnfaip3Q60769 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfaip3Q60769 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Tnfaip3Q60769 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfaip3Q60769 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfaip3Q60769 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms