Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Gm9908-201ENSMUST00000211534 448 ntBASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Gm5425-201ENSMUST00000214125 459 ntBASIC14.93□□□□□ -0.02
Shroom1Q5SX79 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Shroom1Q5SX79 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Shroom1Q5SX79 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Gm12138-201ENSMUST00000122180 951 ntBASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Gm5354-201ENSMUST00000182417 973 ntBASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shroom1Q5SX79 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Gm14127-201ENSMUST00000117906 678 ntBASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Gm4804-201ENSMUST00000182234 999 ntBASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms