Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm15173-201ENSMUST00000122049 433 ntBASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms